Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nif3-like dinuclear metal center hexameric protein | SB49_RS00595 | Not Available | Negative | 126467 - 127561 | 39953.4 |
| tetraacyldisaccharide 4'-kinase | SB49_RS00600 | Not Available | Positive | 127611 - 128603 | 37533.0 |
| response regulator | SB49_RS00605 | Not Available | Negative | 128598 - 130823 | 83821.5 |
| type i glyceraldehyde-3-phosphate dehydrogenase | SB49_RS00610 | Not Available | Negative | 130820 - 131830 | 37091.4 |
| lipoyl synthase | SB49_RS00615 | Not Available | Negative | 131882 - 132757 | 32915.1 |
| rna polymerase sigma factor | SB49_RS00620 | Not Available | Negative | 132896 - 133462 | 21937.3 |
| hypothetical protein | SB49_RS00625 | Not Available | Negative | 133494 - 133703 | 7319.94 |
| anti-sigma factor | SB49_RS00630 | Not Available | Negative | 133780 - 134538 | 29021.1 |
| rna polymerase sigma factor | SB49_RS00635 | Not Available | Negative | 134535 - 135101 | 21746.4 |
| udp-n-acetylmuramate dehydrogenase | SB49_RS00640 | Not Available | Negative | 135314 - 136330 | 38394.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
