Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligosaccharide flippase family protein | SB49_RS06345 | Not Available | Positive | 1428926 - 1430161 | 46296.4 |
| glycosyltransferase | SB49_RS06350 | Not Available | Positive | 1430395 - 1431630 | 45934.2 |
| cellulase family glycosylhydrolase | SB49_RS06355 | Not Available | Negative | 1431712 - 1433259 | 60094.3 |
| hypothetical protein | SB49_RS06360 | Not Available | Negative | 1433256 - 1434443 | 43334.2 |
| hypothetical protein | SB49_RS06365 | Not Available | Negative | 1434481 - 1437567 | 117994.0 |
| response regulator | SB49_RS06370 | Not Available | Positive | 1437788 - 1438927 | 43035.0 |
| hypothetical protein | SB49_RS06375 | Not Available | Negative | 1439135 - 1440673 | 59202.9 |
| hypothetical protein | SB49_RS06380 | Not Available | Negative | 1440882 - 1443098 | 84129.6 |
| bata domain-containing protein | SB49_RS06385 | Not Available | Negative | 1443095 - 1444378 | 49312.3 |
| duf58 domain-containing protein | SB49_RS06390 | Not Available | Negative | 1444380 - 1445276 | 34405.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
