Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3347 domain-containing protein | SB49_RS06295 | Not Available | Negative | 1415766 - 1416323 | 20444.6 |
| tolc family protein | SB49_RS06300 | Not Available | Negative | 1416365 - 1417597 | 47269.8 |
| efflux rnd transporter permease subunit | SB49_RS06305 | Not Available | Negative | 1417603 - 1421364 | 139630.0 |
| hyc_cc_pp family protein | SB49_RS06310 | Not Available | Negative | 1421469 - 1421849 | 14412.7 |
| response regulator | SB49_RS06315 | Not Available | Positive | 1422205 - 1422606 | 15662.2 |
| heme no-binding domain-containing protein | SB49_RS06320 | Not Available | Positive | 1422682 - 1423224 | 20346.3 |
| pas domain-containing sensor histidine kinase | SB49_RS06325 | Not Available | Positive | 1423217 - 1425571 | 89443.7 |
| hypothetical protein | SB49_RS06330 | Not Available | Positive | 1425573 - 1425893 | 12583.2 |
| lyttr family dna-binding domain-containing protein | SB49_RS06335 | Not Available | Positive | 1425896 - 1426603 | 27103.9 |
| tetratricopeptide repeat protein | SB49_RS06340 | Not Available | Negative | 1426644 - 1428653 | 76452.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
