Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | SB49_RS06245 | Not Available | Positive | 1399021 - 1400079 | 39126.8 |
| hypothetical protein | SB49_RS06250 | Not Available | Positive | 1400194 - 1400640 | 17402.7 |
| thioredoxin-disulfide reductase | SB49_RS06255 | Not Available | Negative | 1400714 - 1401679 | 34593.3 |
| pep/pyruvate-binding domain-containing protein | SB49_RS06260 | Not Available | Positive | 1402072 - 1404978 | 109236.0 |
| serine hydrolase | SB49_RS06265 | Not Available | Positive | 1404980 - 1406242 | 47014.9 |
| npt1/npt2 family nucleotide transporter | SB49_RS06270 | Not Available | Negative | 1406246 - 1409077 | 107528.0 |
| serine hydrolase | SB49_RS06275 | Not Available | Negative | 1409304 - 1410209 | 34239.7 |
| efflux rnd transporter periplasmic adaptor subunit | SB49_RS06280 | Not Available | Negative | 1410655 - 1412412 | 64250.2 |
| hypothetical protein | SB49_RS06285 | Not Available | Negative | 1412473 - 1413171 | 27057.7 |
| heavy metal translocating p-type atpase | SB49_RS06290 | Not Available | Negative | 1413182 - 1415680 | 89706.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
