Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase | SB49_RS06195 | Not Available | Negative | 1390973 - 1391503 | 20277.9 |
| gdp-mannose pyrophosphatase nudk | SB49_RS06200 | Not Available | Negative | 1391528 - 1392109 | 22250.6 |
| duf2461 domain-containing protein | SB49_RS06205 | Not Available | Negative | 1392155 - 1392808 | 25520.5 |
| tigr00266 family protein | SB49_RS06210 | Not Available | Negative | 1392879 - 1393679 | 28408.3 |
| duf4442 domain-containing protein | SB49_RS06215 | Not Available | Negative | 1393765 - 1394220 | 16919.3 |
| duf4870 domain-containing protein | SB49_RS06220 | Not Available | Positive | 1394414 - 1394887 | 17872.8 |
| padr family transcriptional regulator | SB49_RS06225 | Not Available | Positive | 1395020 - 1395355 | 12769.4 |
| pspc domain-containing protein | SB49_RS06230 | Not Available | Positive | 1395358 - 1397082 | 64615.7 |
| head gin domain-containing protein | SB49_RS06235 | Not Available | Positive | 1397188 - 1397910 | 24955.2 |
| dipeptide epimerase | SB49_RS06240 | Not Available | Positive | 1398011 - 1399024 | 37556.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
