Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | SB49_RS06145 | Not Available | Positive | 1380593 - 1382149 | 57528.2 |
| 23s rrna pseudouridine(2604) synthase rluf | SB49_RS06150 | Not Available | Positive | 1382175 - 1382909 | 27698.8 |
| fmn-binding negative transcriptional regulator | SB49_RS06155 | Not Available | Positive | 1382936 - 1383544 | 22740.1 |
| porp/sprf family type ix secretion system membrane protein | SB49_RS06160 | Not Available | Negative | 1383567 - 1385288 | 65318.7 |
| nad(p)-dependent alcohol dehydrogenase | SB49_RS06165 | Not Available | Negative | 1385713 - 1386765 | 38275.3 |
| hypothetical protein | SB49_RS06170 | Not Available | Positive | 1387155 - 1387613 | 16111.5 |
| dps family protein | SB49_RS06175 | Not Available | Negative | 1387705 - 1388184 | 18322.1 |
| lysr substrate-binding domain-containing protein | SB49_RS06180 | Not Available | Positive | 1388285 - 1389226 | 35467.1 |
| hypothetical protein | SB49_RS06185 | Not Available | Negative | 1389392 - 1389589 | 7715.69 |
| d-alanyl-d-alanine carboxypeptidase | SB49_RS06190 | Not Available | Positive | 1389736 - 1391007 | 48198.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
