Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | SB49_RS06095 | Not Available | Negative | 1372173 - 1373450 | 48881.8 |
| duf4331 family protein | SB49_RS16230 | Not Available | Negative | 1373545 - 1374198 | 23096.8 |
| duf4331 family protein | SB49_RS16235 | Not Available | Negative | 1374227 - 1374907 | 23871.1 |
| letm1-related biofilm-associated protein | SB49_RS06110 | Not Available | Positive | 1375083 - 1376267 | 45184.2 |
| lyttr family dna-binding domain-containing protein | SB49_RS06115 | Not Available | Negative | 1376362 - 1377117 | 29548.4 |
| 2tm domain-containing protein | SB49_RS06120 | Not Available | Negative | 1377171 - 1377506 | 13318.3 |
| 2tm domain-containing protein | SB49_RS06125 | Not Available | Negative | 1377507 - 1377836 | 13091.8 |
| 2tm domain-containing protein | SB49_RS06130 | Not Available | Negative | 1377867 - 1378169 | 12382.8 |
| 2tm domain-containing protein | SB49_RS06135 | Not Available | Negative | 1378308 - 1379639 | 51257.9 |
| hypothetical protein | SB49_RS06140 | Not Available | Negative | 1379716 - 1380042 | 12015.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
