Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | SB49_RS06045 | Not Available | Positive | 1356725 - 1358140 | 51979.3 |
| amidohydrolase family protein | SB49_RS06050 | Not Available | Positive | 1358219 - 1359484 | 45312.7 |
| vps10 domain-containing protein | SB49_RS06055 | Not Available | Positive | 1359660 - 1362869 | 119842.0 |
| alpha/beta fold hydrolase | SB49_RS06060 | Not Available | Positive | 1362880 - 1364826 | 73022.9 |
| duf2490 domain-containing protein | SB49_RS06065 | Not Available | Positive | 1364898 - 1365605 | 27630.8 |
| bifunctional alpha/beta hydrolase/osmc family protein | SB49_RS06070 | Not Available | Positive | 1365606 - 1366820 | 44164.5 |
| superoxide dismutase family protein | SB49_RS06075 | Not Available | Positive | 1366956 - 1367543 | 21160.8 |
| rna polymerase sigma factor | SB49_RS06080 | Not Available | Positive | 1367625 - 1368155 | 20165.2 |
| anti-sigma factor domain-containing protein | SB49_RS06085 | Not Available | Positive | 1368157 - 1368951 | 29126.5 |
| tonb-dependent receptor domain-containing protein | SB49_RS06090 | Not Available | Negative | 1369876 - 1372101 | 83280.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
