Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pitrilysin family protein | SB49_RS05995 | Not Available | Positive | 1344548 - 1347376 | 106044.0 |
| mechanosensitive ion channel family protein | SB49_RS06000 | Not Available | Positive | 1347602 - 1348516 | 34092.6 |
| saccharopine dehydrogenase family protein | SB49_RS06005 | Not Available | Positive | 1348683 - 1349825 | 41883.3 |
| gaf domain-containing sensor histidine kinase | SB49_RS06010 | Not Available | Positive | 1349993 - 1351180 | 44346.5 |
| gaf domain-containing protein | SB49_RS06015 | Not Available | Positive | 1351389 - 1351904 | 19245.4 |
| gnat family n-acetyltransferase | SB49_RS06020 | Not Available | Positive | 1352055 - 1352579 | 19447.4 |
| nad(p)-dependent oxidoreductase | SB49_RS06025 | Not Available | Positive | 1352743 - 1353417 | 25481.5 |
| duf2254 domain-containing protein | SB49_RS06030 | Not Available | Positive | 1353589 - 1354899 | 48947.4 |
| hypothetical protein | SB49_RS06035 | Not Available | Positive | 1355006 - 1355695 | 26651.7 |
| cdp-alcohol phosphatidyltransferase family protein | SB49_RS06040 | Not Available | Positive | 1355839 - 1356606 | 29099.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
