Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | SB49_RS05945 | Not Available | Positive | 1328541 - 1329731 | 42836.8 |
| acyl-coa dehydrogenase family protein | SB49_RS05950 | Not Available | Positive | 1329804 - 1331615 | 66810.9 |
| pyridoxal-dependent decarboxylase | SB49_RS05955 | Not Available | Positive | 1331729 - 1333177 | 54541.5 |
| glycoside hydrolase family 15 protein | SB49_RS05960 | Not Available | Negative | 1333256 - 1335064 | 69945.4 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | SB49_RS05965 | Not Available | Positive | 1335168 - 1337375 | 84833.0 |
| nuclear transport factor 2 family protein | SB49_RS05970 | Not Available | Positive | 1337396 - 1338583 | 44585.3 |
| mfs transporter | SB49_RS05975 | Not Available | Positive | 1338586 - 1339749 | 41392.0 |
| m28 family peptidase | SB49_RS05980 | Not Available | Positive | 1339811 - 1341145 | 49672.0 |
| m1 family metallopeptidase | SB49_RS05985 | Not Available | Positive | 1341255 - 1342877 | 62538.8 |
| hypothetical protein | SB49_RS05990 | Not Available | Positive | 1343085 - 1344341 | 48233.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
