Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS05895 | Not Available | Positive | 1314072 - 1314587 | 19951.3 |
| hypothetical protein | SB49_RS05900 | Not Available | Positive | 1314577 - 1315026 | 17740.5 |
| vps10 domain-containing protein | SB49_RS05905 | Not Available | Negative | 1315070 - 1316098 | 37596.9 |
| rsmb/nop family class i sam-dependent rna methyltransferase | SB49_RS05910 | Not Available | Positive | 1316170 - 1317381 | 46300.9 |
| amidohydrolase | SB49_RS05915 | Not Available | Negative | 1317461 - 1319065 | 59414.7 |
| phosphoribosylformylglycinamidine synthase | SB49_RS05920 | Not Available | Positive | 1319320 - 1323003 | 134471.0 |
| long-chain fatty acid--coa ligase | SB49_RS05925 | Not Available | Positive | 1323325 - 1325109 | 67503.2 |
| marr family winged helix-turn-helix transcriptional regulator | SB49_RS05930 | Not Available | Positive | 1325240 - 1325692 | 16899.7 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | SB49_RS05935 | Not Available | Positive | 1325705 - 1328110 | 88572.4 |
| four helix bundle protein | SB49_RS05940 | Not Available | Positive | 1328152 - 1328499 | 13196.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
