Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kynureninase | SB49_RS00550 | Not Available | Positive | 116494 - 117762 | 48993.4 |
| mfs transporter | SB49_RS00555 | Not Available | Positive | 117795 - 118937 | 40766.1 |
| hypothetical protein | SB49_RS00560 | Not Available | Negative | 118950 - 119624 | 25834.3 |
| clpp family protease | SB49_RS00565 | Not Available | Positive | 119746 - 120294 | 20174.3 |
| cryptochrome/photolyase family protein | SB49_RS00570 | Not Available | Negative | 120453 - 121985 | 60309.6 |
| dash family cryptochrome | SB49_RS00575 | Not Available | Negative | 122008 - 123309 | 51098.5 |
| duf2256 domain-containing protein | SB49_RS15820 | Not Available | Negative | 123345 - 123479 | 5479.67 |
| flavin reductase family protein | SB49_RS00580 | Not Available | Negative | 123469 - 124113 | 24135.8 |
| nad(p)/fad-dependent oxidoreductase | SB49_RS00585 | Not Available | Positive | 124272 - 125612 | 51445.3 |
| zinc ribbon domain-containing protein | SB49_RS00590 | Not Available | Negative | 125684 - 126463 | 30018.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
