Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | SB49_RS05845 | Not Available | Negative | 1303976 - 1304641 | 25550.2 |
| gnat family n-acetyltransferase | SB49_RS05850 | Not Available | Positive | 1304817 - 1305110 | 11313.8 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | SB49_RS05855 | Not Available | Negative | 1305148 - 1306476 | 50002.6 |
| glmu family protein | SB49_RS05860 | Not Available | Negative | 1306617 - 1307792 | 43817.2 |
| type b 50s ribosomal protein l31 | SB49_RS05865 | Not Available | Negative | 1307874 - 1308128 | 9721.68 |
| duf4199 domain-containing protein | SB49_RS05870 | Not Available | Positive | 1308295 - 1308816 | 18699.7 |
| glycosyltransferase family 2 protein | SB49_RS05875 | Not Available | Positive | 1308851 - 1309807 | 36382.6 |
| phospho-sugar mutase | SB49_RS05880 | Not Available | Positive | 1309857 - 1311566 | 63000.1 |
| abc transporter atp-binding protein | SB49_RS05885 | Not Available | Positive | 1311566 - 1313392 | 68419.5 |
| rna polymerase sigma factor | SB49_RS05890 | Not Available | Positive | 1313496 - 1314038 | 20877.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
