Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS05745 | Not Available | Negative | 1281456 - 1281875 | 16564.8 |
| rna polymerase sigma factor | SB49_RS05750 | Not Available | Negative | 1281862 - 1282371 | 19603.8 |
| s41 family peptidase | SB49_RS05755 | Not Available | Positive | 1282593 - 1284065 | 54653.8 |
| duf5074 domain-containing protein | SB49_RS05760 | Not Available | Negative | 1284135 - 1285196 | 37643.6 |
| tonb-dependent receptor | SB49_RS05765 | Not Available | Negative | 1285210 - 1287051 | 69794.8 |
| abc transporter substrate-binding protein | SB49_RS05770 | Not Available | Positive | 1287515 - 1288660 | 42822.0 |
| iron abc transporter permease | SB49_RS05775 | Not Available | Positive | 1288661 - 1289692 | 36495.2 |
| abc transporter atp-binding protein | SB49_RS05780 | Not Available | Positive | 1289726 - 1290520 | 29616.2 |
| dna recombination protein rmuc | SB49_RS05785 | Not Available | Positive | 1290584 - 1291942 | 52123.4 |
| hypothetical protein | SB49_RS05790 | Not Available | Positive | 1291939 - 1292304 | 14123.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
