Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxylating nicotinate-nucleotide diphosphorylase | SB49_RS05645 | Not Available | Negative | 1262900 - 1263757 | 31485.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | SB49_RS05650 | Not Available | Positive | 1263854 - 1264327 | 18250.3 |
| phosphoglycerate dehydrogenase | SB49_RS05655 | Not Available | Negative | 1264385 - 1266277 | 70694.7 |
| duf3307 domain-containing protein | SB49_RS05660 | Not Available | Negative | 1266501 - 1267211 | 27062.2 |
| satd family protein | SB49_RS05665 | Not Available | Negative | 1267208 - 1267819 | 22622.1 |
| isoprenylcysteine carboxylmethyltransferase family protein | SB49_RS05670 | Not Available | Negative | 1267900 - 1268352 | 17052.7 |
| non-canonical purine ntp diphosphatase | SB49_RS05675 | Not Available | Positive | 1268448 - 1269026 | 21375.5 |
| dead/deah box helicase | SB49_RS05680 | Not Available | Positive | 1269282 - 1271102 | 67633.4 |
| carboxypeptidase-like regulatory domain-containing protein | SB49_RS05685 | Not Available | Positive | 1271209 - 1271958 | 28190.9 |
| alpha-amylase family glycosyl hydrolase | SB49_RS05690 | Not Available | Positive | 1272089 - 1273783 | 64374.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
