Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6495 family protein | SB49_RS05595 | Not Available | Negative | 1252291 - 1252761 | 18390.8 |
| carboxypeptidase regulatory-like domain-containing protein | SB49_RS05600 | Not Available | Negative | 1252891 - 1256058 | 116279.0 |
| 50s ribosomal protein l9 | SB49_RS05605 | Not Available | Negative | 1256158 - 1256613 | 16562.2 |
| 30s ribosomal protein s18 | SB49_RS05610 | Not Available | Negative | 1256627 - 1256923 | 11373.1 |
| 30s ribosomal protein s6 | SB49_RS05615 | Not Available | Negative | 1256928 - 1257266 | 13238.0 |
| lyttr family dna-binding domain-containing protein | SB49_RS05620 | Not Available | Positive | 1257501 - 1258193 | 26350.9 |
| lyttr family dna-binding domain-containing protein | SB49_RS05625 | Not Available | Positive | 1258331 - 1259023 | 26561.5 |
| primosomal protein n' | SB49_RS05630 | Not Available | Negative | 1259024 - 1261480 | 93696.9 |
| duf2147 domain-containing protein | SB49_RS05635 | Not Available | Negative | 1261495 - 1261935 | 17024.8 |
| yihy/virulence factor brkb family protein | SB49_RS05640 | Not Available | Negative | 1261919 - 1262899 | 36906.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
