Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5' nucleotidase, nt5c type | SB49_RS05540 | Not Available | Positive | 1242114 - 1242635 | 20578.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1242780 - 1242891 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1243016 - 1245847 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1246028 - 1246104 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1246225 - 1246301 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1246392 - 1247909 | Not Available |
| duf4294 domain-containing protein | SB49_RS05575 | Not Available | Negative | 1248390 - 1249064 | 26559.2 |
| m42 family metallopeptidase | SB49_RS05580 | Not Available | Positive | 1249167 - 1250255 | 40627.6 |
| nudix domain-containing protein | SB49_RS05585 | Not Available | Positive | 1250307 - 1250855 | 20706.7 |
| histidine--trna ligase | SB49_RS05590 | Not Available | Negative | 1250850 - 1252226 | 50917.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
