Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyceraldehyde-3-phosphate dehydrogenase | SB49_RS05490 | Not Available | Positive | 1229164 - 1230609 | 53446.0 |
| hypothetical protein | SB49_RS05495 | Not Available | Positive | 1230805 - 1231437 | 24362.3 |
| trna (guanosine(37)-n1)-methyltransferase trmd | SB49_RS05500 | Not Available | Positive | 1231583 - 1232257 | 25353.8 |
| 50s ribosomal protein l19 | SB49_RS05505 | Not Available | Positive | 1232397 - 1232747 | 13418.6 |
| nadp-dependent isocitrate dehydrogenase | SB49_RS05510 | Not Available | Positive | 1233549 - 1235768 | 80915.8 |
| tonb-dependent receptor | SB49_RS05515 | Not Available | Positive | 1235886 - 1238261 | 89880.8 |
| duf4249 family protein | SB49_RS05520 | Not Available | Positive | 1238308 - 1239081 | 28947.2 |
| gntp family permease | SB49_RS05525 | Not Available | Negative | 1239088 - 1240428 | 46812.8 |
| glycerate kinase | SB49_RS05530 | Not Available | Negative | 1240441 - 1241574 | 40515.0 |
| duf6095 family protein | SB49_RS05535 | Not Available | Positive | 1241695 - 1241934 | 8754.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
