Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yigz family protein | SB49_RS05440 | Not Available | Positive | 1220480 - 1221100 | 23427.2 |
| thioesterase family protein | SB49_RS05445 | Not Available | Negative | 1221107 - 1221505 | 15503.1 |
| chromosomal replication initiator protein dnaa | SB49_RS05450 | Not Available | Positive | 1221713 - 1223137 | 54045.1 |
| low molecular weight protein-tyrosine-phosphatase | SB49_RS05455 | Not Available | Positive | 1223147 - 1223605 | 17201.6 |
| sam-dependent methyltransferase | SB49_RS05460 | Not Available | Positive | 1223615 - 1224340 | 26890.9 |
| hypothetical protein | SB49_RS05465 | Not Available | Negative | 1224390 - 1224992 | 22366.2 |
| endolytic transglycosylase mltg | SB49_RS05470 | Not Available | Negative | 1225178 - 1226221 | 39854.8 |
| gnat family n-acetyltransferase | SB49_RS05475 | Not Available | Negative | 1226221 - 1226745 | 19924.9 |
| diaminopimelate epimerase | SB49_RS05480 | Not Available | Negative | 1226739 - 1227515 | 28226.5 |
| s1c family serine protease | SB49_RS05485 | Not Available | Positive | 1227648 - 1229045 | 49734.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
