Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase c-terminal domain-containing protein | SB49_RS05390 | Not Available | Positive | 1212018 - 1212782 | 28338.1 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | SB49_RS05395 | Not Available | Positive | 1212784 - 1213695 | 33465.1 |
| gyri-like domain-containing protein | SB49_RS05400 | Not Available | Positive | 1213702 - 1214184 | 18287.8 |
| hypothetical protein | SB49_RS05405 | Not Available | Negative | 1214195 - 1214497 | 11713.6 |
| nad-dependent dna ligase liga | SB49_RS05410 | Not Available | Negative | 1214509 - 1216506 | 74957.4 |
| peptide chain release factor n(5)-glutamine methyltransferase | SB49_RS05415 | Not Available | Negative | 1216585 - 1217436 | 32593.5 |
| gnat family n-acetyltransferase | SB49_RS05420 | Not Available | Negative | 1217442 - 1217927 | 18371.2 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | SB49_RS05425 | Not Available | Positive | 1217968 - 1219020 | 39366.1 |
| had-ia family hydrolase | SB49_RS05430 | Not Available | Positive | 1219013 - 1219615 | 23523.2 |
| dmt family transporter | SB49_RS05435 | Not Available | Positive | 1219617 - 1220480 | 31595.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
