Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS00500 | Not Available | Negative | 105828 - 108731 | 99238.8 |
| dipeptidase pepe | SB49_RS00505 | Not Available | Negative | 108860 - 109552 | 25530.7 |
| carboxypeptidase-like regulatory domain-containing protein | SB49_RS00510 | Not Available | Positive | 109747 - 110499 | 29048.5 |
| carboxypeptidase-like regulatory domain-containing protein | SB49_RS00515 | Not Available | Positive | 110525 - 111268 | 27704.2 |
| duf6702 family protein | SB49_RS00520 | Not Available | Positive | 111335 - 111847 | 19754.3 |
| m1 family metallopeptidase | SB49_RS00525 | Not Available | Positive | 111907 - 114216 | 88668.2 |
| twin-arginine translocase tata/tate family subunit | SB49_RS00530 | Not Available | Positive | 114400 - 114681 | 10475.9 |
| phosphatase pap2 family protein | SB49_RS00535 | Not Available | Positive | 114690 - 115265 | 22480.8 |
| o-methyltransferase | SB49_RS00540 | Not Available | Negative | 115228 - 115869 | 23805.8 |
| gnat family n-acetyltransferase | SB49_RS00545 | Not Available | Positive | 115955 - 116419 | 17865.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
