Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdar family protein | SB49_RS05340 | Not Available | Negative | 1202505 - 1203461 | 36227.1 |
| glycosyltransferase family 2 protein | SB49_RS05345 | Not Available | Negative | 1203468 - 1204475 | 38015.1 |
| enoyl-acp reductase | SB49_RS05350 | Not Available | Negative | 1204544 - 1205356 | 29628.1 |
| dna repair protein recn | SB49_RS05355 | Not Available | Negative | 1205409 - 1207061 | 61593.2 |
| duf4835 family protein | SB49_RS05360 | Not Available | Negative | 1207119 - 1208009 | 34518.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | SB49_RS05365 | Not Available | Negative | 1208002 - 1209207 | 42992.2 |
| dna-directed rna polymerase subunit omega | SB49_RS05370 | Not Available | Negative | 1209211 - 1209543 | 12751.0 |
| outer membrane protein assembly factor bamd | SB49_RS05375 | Not Available | Negative | 1209557 - 1210366 | 31133.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SB49_RS05380 | Not Available | Negative | 1210525 - 1211415 | 31710.8 |
| duf6913 domain-containing protein | SB49_RS05385 | Not Available | Negative | 1211415 - 1211951 | 20549.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
