Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1015 domain-containing protein | SB49_RS05290 | Not Available | Positive | 1192457 - 1193692 | 47731.7 |
| yggs family pyridoxal phosphate-dependent enzyme | SB49_RS05295 | Not Available | Positive | 1193740 - 1194399 | 25059.4 |
| exonuclease domain-containing protein | SB49_RS05300 | Not Available | Positive | 1194438 - 1195799 | 51369.0 |
| ion transporter | SB49_RS05305 | Not Available | Positive | 1195851 - 1196693 | 31431.9 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | SB49_RS05310 | Not Available | Positive | 1196693 - 1197604 | 34833.2 |
| gluconokinase | SB49_RS05315 | Not Available | Positive | 1197608 - 1198108 | 18850.8 |
| gntp family permease | SB49_RS05320 | Not Available | Positive | 1198150 - 1199484 | 46805.1 |
| response regulator transcription factor | SB49_RS05325 | Not Available | Negative | 1199541 - 1200251 | 27406.4 |
| sensor histidine kinase kdpd | SB49_RS05330 | Not Available | Negative | 1200261 - 1201841 | 60134.4 |
| dephospho-coa kinase | SB49_RS05335 | Not Available | Negative | 1201927 - 1202508 | 21910.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
