Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol system redox-active protein ytxj | SB49_RS05240 | Not Available | Negative | 1182370 - 1182765 | 14877.7 |
| atp-dependent chaperone clpb | SB49_RS05245 | Not Available | Positive | 1182932 - 1185532 | 97055.7 |
| tetr/acrr family transcriptional regulator | SB49_RS05250 | Not Available | Positive | 1185645 - 1186241 | 21912.4 |
| porp/sprf family type ix secretion system membrane protein | SB49_RS05255 | Not Available | Negative | 1186244 - 1187647 | 52515.6 |
| phosphoglycerate mutase family protein | SB49_RS05260 | Not Available | Positive | 1187732 - 1188268 | 20349.3 |
| duf6503 family protein | SB49_RS05265 | Not Available | Negative | 1188271 - 1189011 | 28303.7 |
| ssra-binding protein smpb | SB49_RS05270 | Not Available | Positive | 1189126 - 1189587 | 17701.5 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SB49_RS05275 | Not Available | Negative | 1189617 - 1190258 | 24260.7 |
| gfo/idh/moca family protein | SB49_RS05280 | Not Available | Positive | 1190498 - 1191466 | 35888.0 |
| 3-hydroxyacyl-coa dehydrogenase family protein | SB49_RS05285 | Not Available | Positive | 1191561 - 1192448 | 32236.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
