Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase family protein | SB49_RS05195 | Not Available | Positive | 1171439 - 1171828 | 15161.2 |
| hypothetical protein | SB49_RS05200 | Not Available | Positive | 1171847 - 1173394 | 56582.9 |
| lyttr family dna-binding domain-containing protein | SB49_RS05205 | Not Available | Positive | 1173552 - 1174283 | 28491.2 |
| hypothetical protein | SB49_RS16015 | Not Available | Positive | 1174424 - 1174582 | 5699.82 |
| tetratricopeptide repeat protein | SB49_RS05210 | Not Available | Positive | 1174791 - 1176752 | 74150.7 |
| response regulator transcription factor | SB49_RS05215 | Not Available | Positive | 1176768 - 1177436 | 25335.8 |
| hypothetical protein | SB49_RS05220 | Not Available | Positive | 1177590 - 1178255 | 25542.1 |
| serine hydroxymethyltransferase | SB49_RS05225 | Not Available | Negative | 1178311 - 1179585 | 46231.4 |
| fumarylacetoacetase | SB49_RS05230 | Not Available | Positive | 1179698 - 1180987 | 48229.3 |
| hypothetical protein | SB49_RS05235 | Not Available | Positive | 1181130 - 1182317 | 45803.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
