Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | SB49_RS05145 | Not Available | Positive | 1160377 - 1162803 | 90429.8 |
| fasciclin domain-containing protein | SB49_RS05150 | Not Available | Negative | 1162859 - 1163374 | 18099.3 |
| fasciclin domain-containing protein | SB49_RS05155 | Not Available | Negative | 1163542 - 1164114 | 20617.9 |
| hypothetical protein | SB49_RS05160 | Not Available | Positive | 1164317 - 1165033 | 27677.7 |
| abc-f family atp-binding cassette domain-containing protein | SB49_RS05165 | Not Available | Negative | 1165130 - 1166758 | 61113.6 |
| redoxin domain-containing protein | SB49_RS05170 | Not Available | Positive | 1166879 - 1168312 | 56414.7 |
| fructose-6-phosphate aldolase | SB49_RS05175 | Not Available | Negative | 1168393 - 1169046 | 23639.6 |
| sdr family oxidoreductase | SB49_RS05180 | Not Available | Negative | 1169126 - 1169935 | 30010.4 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 1170047 - 1170145 | Not Available |
| glutaminyl-peptide cyclotransferase | SB49_RS05190 | Not Available | Positive | 1170391 - 1171434 | 39236.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
