Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnak | SB49_RS05095 | Not Available | Negative | 1148189 - 1150096 | 68580.2 |
| l-serine ammonia-lyase | SB49_RS05100 | Not Available | Positive | 1150432 - 1151856 | 51984.9 |
| nuclear transport factor 2 family protein | SB49_RS05105 | Not Available | Negative | 1151860 - 1152312 | 17232.4 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SB49_RS05110 | Not Available | Positive | 1152430 - 1153248 | 30021.5 |
| rlua family pseudouridine synthase | SB49_RS05115 | Not Available | Positive | 1153255 - 1153953 | 26469.1 |
| dmt family transporter | SB49_RS05120 | Not Available | Negative | 1153959 - 1154825 | 31893.7 |
| hypothetical protein | SB49_RS05125 | Not Available | Negative | 1154826 - 1156370 | 61063.6 |
| 2-isopropylmalate synthase | SB49_RS05130 | Not Available | Positive | 1156517 - 1157689 | 42963.3 |
| 3-isopropylmalate dehydrogenase | SB49_RS05135 | Not Available | Positive | 1157689 - 1158807 | 40681.9 |
| peroxiredoxin | SB49_RS05140 | Not Available | Negative | 1158862 - 1160085 | 46002.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
