Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2853 family protein | SB49_RS05045 | Not Available | Negative | 1138845 - 1139186 | 12843.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | SB49_RS05050 | Not Available | Negative | 1139225 - 1140955 | 65177.7 |
| chorismate-binding protein | SB49_RS05055 | Not Available | Negative | 1141007 - 1142134 | 43142.2 |
| paai family thioesterase | SB49_RS05060 | Not Available | Negative | 1142136 - 1142558 | 15563.0 |
| alpha/beta hydrolase | SB49_RS05065 | Not Available | Positive | 1142669 - 1143310 | 24496.3 |
| crp/fnr family transcriptional regulator | SB49_RS05070 | Not Available | Positive | 1143628 - 1144335 | 27179.9 |
| hypothetical protein | SB49_RS05075 | Not Available | Positive | 1144567 - 1145106 | 20290.0 |
| hypothetical protein | SB49_RS05080 | Not Available | Positive | 1145423 - 1145950 | 20165.1 |
| hypothetical protein | SB49_RS05085 | Not Available | Positive | 1146237 - 1147058 | 31149.7 |
| hypothetical protein | SB49_RS05090 | Not Available | Negative | 1147131 - 1147985 | 33274.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
