Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | SB49_RS04995 | Not Available | Negative | 1128270 - 1129349 | 39772.1 |
| cpbp family intramembrane glutamic endopeptidase | SB49_RS05000 | Not Available | Negative | 1129361 - 1130293 | 35096.0 |
| o-succinylbenzoate synthase | SB49_RS05005 | Not Available | Negative | 1130284 - 1131336 | 39782.1 |
| sdr family oxidoreductase | SB49_RS05010 | Not Available | Positive | 1131384 - 1132178 | 29592.5 |
| metal-dependent hydrolase | SB49_RS05015 | Not Available | Negative | 1132179 - 1132859 | 24859.0 |
| histidine kinase dimerization/phosphoacceptor domain -containing protein | SB49_RS05020 | Not Available | Negative | 1132881 - 1134842 | 75516.5 |
| lyttr family dna-binding domain-containing protein | SB49_RS05025 | Not Available | Negative | 1135436 - 1136188 | 28771.4 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | SB49_RS05030 | Not Available | Negative | 1136222 - 1137130 | 33515.7 |
| hypothetical protein | SB49_RS05035 | Not Available | Negative | 1137133 - 1137732 | 22797.3 |
| s1 rna-binding domain-containing protein | SB49_RS05040 | Not Available | Negative | 1137912 - 1138742 | 31813.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
