Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent metalloprotease | SB49_RS04895 | Not Available | Negative | 1104484 - 1106901 | 91056.2 |
| circularly permuted type 2 atp-grasp protein | SB49_RS04900 | Not Available | Positive | 1107094 - 1108560 | 55385.2 |
| alpha-e domain-containing protein | SB49_RS04905 | Not Available | Positive | 1108570 - 1109517 | 36705.0 |
| transglutaminase family protein | SB49_RS04910 | Not Available | Positive | 1109561 - 1110412 | 32443.1 |
| peptide chain release factor 2 | SB49_RS04915 | Not Available | Positive | 1110478 - 1111579 | 41716.5 |
| arsenate reductase (glutaredoxin) | SB49_RS04920 | Not Available | Positive | 1111661 - 1112002 | 13153.2 |
| hypothetical protein | SB49_RS04925 | Not Available | Positive | 1112164 - 1112631 | 17902.6 |
| tonb-dependent receptor domain-containing protein | SB49_RS04930 | Not Available | Positive | 1112654 - 1115134 | 93359.6 |
| hypothetical protein | SB49_RS16100 | Not Available | Negative | 1115394 - 1115567 | 6824.56 |
| class ii fumarate hydratase | SB49_RS04940 | Not Available | Positive | 1115691 - 1117088 | 50245.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
