Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas plecoglossicida
Strain	strain NyZ12

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	soil environments
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
nad(p)h-hydrate dehydratase	RK21_RS27040	Not Available	Positive	5948843 - 5949703	29043.3
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae	RK21_RS27045	Not Available	Positive	5949691 - 5950164	16921.2
n-acetylmuramoyl-l-alanine amidase	RK21_RS27050	Not Available	Positive	5950176 - 5951606	50792.9
dna mismatch repair endonuclease mutl	RK21_RS27055	Not Available	Positive	5951603 - 5953498	69685.2
trna (adenosine(37)-n6)-dimethylallyltransferase miaa	RK21_RS27060	Not Available	Positive	5953500 - 5954471	35506.8
rna chaperone hfq	RK21_RS27065	Not Available	Positive	5954566 - 5954826	9448.33
ribosome rescue gtpase hflx	RK21_RS27070	Not Available	Positive	5954839 - 5956140	48857.6
ftsh protease activity modulator hflk	RK21_RS27075	Not Available	Positive	5956237 - 5957418	43490.1
protease modulator hflc	RK21_RS27080	Not Available	Positive	5957418 - 5958287	32983.4
atp phosphoribosyltransferase regulatory subunit	RK21_RS27085	Not Available	Positive	5958589 - 5959776	42989.5