Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas plecoglossicida
Strain	strain NyZ12

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	soil environments
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
methionine abc transporter permease	RK21_RS25565	Not Available	Negative	5596043 - 5596687	22958.0
methionine abc transporter atp-binding protein	RK21_RS25570	Not Available	Negative	5596677 - 5597786	40665.5
metq/nlpa family abc transporter substrate-binding protein	RK21_RS25575	Not Available	Negative	5597788 - 5598588	28666.4
llm class flavin-dependent oxidoreductase	RK21_RS25580	Not Available	Negative	5598581 - 5599972	51265.4
sfnb family sulfur acquisition oxidoreductase	RK21_RS25585	Not Available	Negative	5599972 - 5601153	42838.3
sfnb family sulfur acquisition oxidoreductase	RK21_RS25590	Not Available	Negative	5601305 - 5602546	45388.9
l-cystine abc transporter atp-binding protein tcyn	RK21_RS25595	Not Available	Negative	5602873 - 5603631	27641.7
cystine abc transporter permease	RK21_RS25600	Not Available	Negative	5603634 - 5604302	24516.7
cystine abc transporter substrate-binding protein	RK21_RS25605	Not Available	Negative	5604299 - 5605093	28794.7
serine o-acetyltransferase epsc	RK21_RS25610	Not Available	Positive	5605484 - 5606416	33462.1