Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sensor histidine kinaseRK21_RS01630Not AvailableNegative361254 - 36315870256.2
amino acid abc transporter atp-binding proteinRK21_RS01635Not AvailableNegative363231 - 36396526956.9
amino acid abc transporter permeaseRK21_RS01640Not AvailableNegative363962 - 36463324675.0
amino acid abc transporter permeaseRK21_RS01645Not AvailableNegative364634 - 36538027431.0
glutamate/aspartate abc transporter substrate-binding proteinRK21_RS01650Not AvailableNegative365522 - 36643933257.1
nel-type e3 ubiquitin ligase domain-containing proteinRK21_RS01655Not AvailableNegative366762 - 370937157362.0
glycerol-3-phosphate dehydrogenaseRK21_RS01660Not AvailableNegative371036 - 37256856500.8
dna-binding transcriptional repressor glprRK21_RS01665Not AvailableNegative372821 - 37357627747.3
glycerol kinase glpkRK21_RS01670Not AvailableNegative373853 - 37535255327.4
mip/aquaporin family proteinRK21_RS01675Not AvailableNegative375404 - 37625529806.7

Displaying genes 501 – 510 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.