Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas plecoglossicida
Strain	strain NyZ12

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	soil environments
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
abc transporter permease subunit	RK21_RS23055	Not Available	Negative	5039518 - 5040411	32235.3
abc transporter permease subunit	RK21_RS23060	Not Available	Negative	5040408 - 5041328	34428.3
polyamine abc transporter atp-binding protein	RK21_RS23065	Not Available	Negative	5041325 - 5042467	42462.5
polyamine abc transporter substrate-binding protein	RK21_RS23070	Not Available	Negative	5042539 - 5043633	39849.7
polyamine abc transporter substrate-binding protein	RK21_RS23075	Not Available	Negative	5043792 - 5044889	40081.9
aspartate aminotransferase family protein	RK21_RS23080	Not Available	Negative	5045060 - 5046421	49755.0
glutamine synthetase family protein	RK21_RS23085	Not Available	Negative	5046468 - 5047826	50932.7
hypothetical protein	RK21_RS23090	Not Available	Positive	5047868 - 5048128	9440.32
glutamine synthetase family protein	RK21_RS23095	Not Available	Positive	5048401 - 5049777	51033.5
amino-acid n-acetyltransferase	RK21_RS23100	Not Available	Negative	5049928 - 5051226	47391.9