Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillin acylase family proteinRK21_RS22960Not AvailablePositive5017626 - 501998986251.8
alpha/beta fold hydrolaseRK21_RS22965Not AvailablePositive5020055 - 502087330428.8
transporter substrate-binding domain-containing proteinRK21_RS22970Not AvailableNegative5020997 - 502186931923.2
amino acid abc transporter atp-binding proteinRK21_RS22975Not AvailableNegative5021866 - 502263928741.1
amino acid abc transporter permeaseRK21_RS22980Not AvailableNegative5022636 - 502329523770.8
amino acid abc transporter permeaseRK21_RS22985Not AvailableNegative5023276 - 502394124287.7
metq/nlpa family abc transporter substrate-binding proteinRK21_RS22990Not AvailableNegative5024127 - 502491228278.3
sigma 54-interacting transcriptional regulatorRK21_RS22995Not AvailableNegative5025088 - 502591830265.1
alpha/beta hydrolaseRK21_RS23000Not AvailableNegative5025983 - 502656421584.6
sulfate/molybdate abc transporter atp-binding proteinRK21_RS23005Not AvailableNegative5027220 - 502820937041.2

Displaying genes 4731 – 4740 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.