Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoenolpyruvate carboxykinaseRK21_RS22910Not AvailableNegative5008210 - 500975155511.8
hsp33 family molecular chaperone hsloRK21_RS22915Not AvailableNegative5009931 - 501083033415.2
phosphatase pap2 family proteinRK21_RS22920Not AvailablePositive5010952 - 501174629885.1
rna-binding s4 domain-containing proteinRK21_RS22925Not AvailableNegative5011876 - 501227715152.1
atp-dependent zinc proteaseRK21_RS22930Not AvailablePositive5012387 - 501286917555.3
30s ribosomal protein s6--l-glutamate ligaseRK21_RS22935Not AvailablePositive5012866 - 501377132667.3
duf6436 domain-containing proteinRK21_RS22940Not AvailablePositive5013835 - 501439820344.6
s-type pyocin domain-containing proteinRK21_RS22945Not AvailablePositive5014484 - 501667679797.8
bacteriocin immunity proteinRK21_RS22950Not AvailablePositive5016673 - 501694810133.0
sugar o-acetyltransferaseRK21_RS22955Not AvailableNegative5016988 - 501753919715.6

Displaying genes 4721 – 4730 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.