Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas plecoglossicida
Strain	strain NyZ12

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	soil environments
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
selenocysteine-specific translation elongation factor	RK21_RS21625	Not Available	Negative	4725730 - 4727652	70231.8
l-seryl-trna(sec) selenium transferase	RK21_RS21630	Not Available	Negative	4727649 - 4729076	51581.7
formate dehydrogenase accessory protein fdhe	RK21_RS21635	Not Available	Negative	4729236 - 4730156	33205.1
formate dehydrogenase subunit gamma	RK21_RS21640	Not Available	Negative	4730161 - 4730817	24909.0
formate dehydrogenase subunit beta	RK21_RS21645	Not Available	Negative	4730814 - 4731764	34496.1
formate dehydrogenase-n subunit alpha	RK21_RS21650	Not Available	Negative	4731764 - 4734832	113460.0
sdr family nad(p)-dependent oxidoreductase	RK21_RS21660	Not Available	Negative	4735105 - 4735866	26804.4
tsup family transporter	RK21_RS21665	Not Available	Negative	4735888 - 4736673	27741.0
plp-dependent aminotransferase family protein	RK21_RS21670	Not Available	Positive	4736873 - 4738252	50335.3
single-stranded dna-binding protein	RK21_RS21675	Not Available	Negative	4738396 - 4738938	19958.2