Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
omph family outer membrane proteinRK21_RS18205Not AvailableNegative3995175 - 399567818840.0
outer membrane protein assembly factor bamaRK21_RS18210Not AvailableNegative3995723 - 399808386657.8
rip metalloprotease rsepRK21_RS18215Not AvailableNegative3998158 - 399951048067.0
1-deoxy-d-xylulose-5-phosphate reductoisomeraseRK21_RS18220Not AvailableNegative3999582 - 400077242473.4
phosphatidate cytidylyltransferaseRK21_RS18225Not AvailableNegative4000769 - 400158429202.8
polyprenyl diphosphate synthaseRK21_RS18230Not AvailableNegative4001584 - 400233927967.4
ribosome recycling factorRK21_RS18235Not AvailableNegative4002355 - 400291220197.2
ump kinaseRK21_RS18240Not AvailableNegative4002909 - 400365226485.4
translation elongation factor tsRK21_RS18245Not AvailableNegative4003833 - 400469630283.5
30s ribosomal protein s2RK21_RS18250Not AvailableNegative4004883 - 400562027024.7

Displaying genes 3771 – 3780 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.