Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cobyrinate a,c-diamide synthaseRK21_RS17850Not AvailableNegative3925321 - 392661645854.1
cob(i)yrinic acid a,c-diamide adenosyltransferaseRK21_RS17855Not AvailableNegative3926613 - 392722422662.4
hypothetical proteinRK21_RS17860Not AvailablePositive3927732 - 392831021411.2
carbon storage regulator csraRK21_RS17865Not AvailableNegative3928513 - 39287759048.67
is3 family transposaseRK21_RS29265Not AvailablePositive3929189 - 393035144951.8
hypothetical proteinRK21_RS29895Not AvailableNegative3930375 - 39305877737.42
pqq-dependent sugar dehydrogenaseRK21_RS17885Not AvailablePositive3931296 - 393264247987.0
c40 family peptidaseRK21_RS17890Not AvailableNegative3932608 - 393314118820.6
c40 family peptidaseRK21_RS17895Not AvailableNegative3933282 - 393393523481.9
dnaa regulatory inactivator hdaRK21_RS17900Not AvailableNegative3934061 - 393476826530.3

Displaying genes 3701 – 3710 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.