Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marr family winged helix-turn-helix transcriptional regulatorRK21_RS17800Not AvailableNegative3916665 - 391706914803.8
glycoside hydrolase family 5 proteinRK21_RS17805Not AvailableNegative3917130 - 391824542435.0
adenosylcobinamide-gdp ribazoletransferaseRK21_RS17810Not AvailableNegative3918471 - 391919325492.6
histidine phosphatase family proteinRK21_RS17815Not AvailableNegative3919195 - 391976120679.7
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseRK21_RS17820Not AvailableNegative3919758 - 392081335903.4
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferaseRK21_RS17825Not AvailableNegative3920810 - 392133118814.2
cobyric acid synthaseRK21_RS17830Not AvailableNegative3921333 - 392278751530.2
threonine-phosphate decarboxylase cobdRK21_RS17835Not AvailableNegative3922784 - 392377636165.8
adenosylcobinamide-phosphate synthase cbibRK21_RS17840Not AvailableNegative3923769 - 392467732807.9
5,6-dimethylbenzimidazole synthaseRK21_RS17845Not AvailableNegative3924674 - 392532423977.2

Displaying genes 3691 – 3700 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.