Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferaseRK21_RS17300Not AvailablePositive3799747 - 380069735506.3
rhamnan synthesis f family proteinRK21_RS17305Not AvailableNegative3800775 - 3804614141666.0
abc transporter atp-binding proteinRK21_RS17315Not AvailableNegative3804699 - 380607550210.7
abc transporter permeaseRK21_RS17320Not AvailableNegative3806065 - 380689531025.2
dtdp-4-dehydrorhamnose 3,5-epimeraseRK21_RS17325Not AvailableNegative3807004 - 380754920441.2
glycosyltransferase family 2 proteinRK21_RS17330Not AvailableNegative3807656 - 380861235631.7
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseRK21_RS17335Not AvailableNegative3808758 - 381020052956.2
mbl fold metallo-hydrolase rna specificity domain-containing proteinRK21_RS17340Not AvailableNegative3810474 - 381190451464.9
lipopolysaccharide assembly protein lapa domain-containing proteinRK21_RS17345Not AvailableNegative3812007 - 38122709122.63
integration host factor subunit betaRK21_RS17350Not AvailableNegative3812290 - 381258911217.5

Displaying genes 3591 – 3600 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.