Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-proNot AvailableNot AvailablePositive3466991 - 3467067Not Available
malate dehydrogenase (quinone)RK21_RS15805Not AvailableNegative3467208 - 346878257539.0
methyl-accepting chemotaxis proteinRK21_RS15810Not AvailableNegative3469090 - 347070658319.4
abc transporter transmembrane domain-containing proteinRK21_RS15815Not AvailableNegative3470899 - 347266263358.7
pa1571 family proteinRK21_RS30155Not AvailablePositive3472875 - 34730486330.62
4-phosphoerythronate dehydrogenase pdxbRK21_RS15820Not AvailableNegative3473225 - 347436741550.7
sulfurtransferase tusaRK21_RS15825Not AvailableNegative3474428 - 34746708996.88
23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmmRK21_RS15835Not AvailableNegative3475573 - 347663740011.6
aconitate hydratase acnaRK21_RS15840Not AvailablePositive3476854 - 347959599274.6
cpbp family intramembrane glutamic endopeptidaseRK21_RS15845Not AvailablePositive3479655 - 348043128176.5

Displaying genes 3291 – 3300 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.