Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2840 domain-containing proteinRK21_RS10770Not AvailableNegative2387156 - 238768919282.5
hypothetical proteinRK21_RS10775Not AvailableNegative2387686 - 23879589851.91
para family partition atpaseRK21_RS10780Not AvailableNegative2387955 - 238859322963.9
replication initiator protein aRK21_RS10785Not AvailableNegative2388847 - 238970432370.1
helix-turn-helix transcriptional regulatorRK21_RS10790Not AvailableNegative2389731 - 239001210419.2
duf2285 domain-containing proteinRK21_RS10795Not AvailableNegative2390096 - 239085727948.4
duf2958 domain-containing proteinRK21_RS10800Not AvailableNegative2391167 - 239151712342.8
helix-turn-helix domain-containing proteinRK21_RS10805Not AvailablePositive2391758 - 239206311223.7
duf736 domain-containing proteinRK21_RS10810Not AvailableNegative2392127 - 239244111262.2
cdf family co(ii)/ni(ii) efflux transporter dmefRK21_RS10820Not AvailableNegative2393276 - 239424735037.0

Displaying genes 2331 – 2340 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.