Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
general stress proteinRK21_RS09450Not AvailablePositive2125348 - 21255577283.08
duf6555 family proteinRK21_RS09455Not AvailablePositive2125725 - 21259829542.58
hypothetical proteinRK21_RS29755Not AvailableNegative2126238 - 21264086058.54
phenylacetic acid degradation bifunctional protein paazRK21_RS09460Not AvailableNegative2126565 - 212861672860.1
oprd family porinRK21_RS09465Not AvailableNegative2128646 - 212987845365.1
cation acetate symporterRK21_RS09470Not AvailableNegative2129919 - 213148155012.7
duf485 domain-containing proteinRK21_RS09475Not AvailableNegative2131478 - 213178611185.9
1,2-phenylacetyl-coa epoxidase subunit paaeRK21_RS09480Not AvailableNegative2131956 - 213303239577.8
1,2-phenylacetyl-coa epoxidase subunit paadRK21_RS09485Not AvailableNegative2133048 - 213358119323.2
1,2-phenylacetyl-coa epoxidase subunit paacRK21_RS09490Not AvailableNegative2133568 - 213432627952.3

Displaying genes 2071 – 2080 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.