Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metallothioneinRK21_RS09400Not AvailablePositive2114857 - 21150817939.24
hypothetical proteinRK21_RS09405Not AvailableNegative2115275 - 211570315309.2
lysylphosphatidylglycerol synthase domain-containing proteinRK21_RS09410Not AvailableNegative2115738 - 211668534757.8
cardiolipin synthase clsbRK21_RS09415Not AvailableNegative2116685 - 211788745395.4
endonuclease/exonuclease/phosphatase family proteinRK21_RS09420Not AvailableNegative2117884 - 211866929529.6
duf72 domain-containing proteinRK21_RS09425Not AvailableNegative2118666 - 211958335074.9
low affinity iron permease family proteinRK21_RS09430Not AvailablePositive2119749 - 212012314287.2
atp-dependent clp protease proteolytic subunitRK21_RS09435Not AvailablePositive2120146 - 212069720446.5
nudix hydrolaseRK21_RS09440Not AvailableNegative2120806 - 212120414970.3
cher family methyltransferaseRK21_RS09445Not AvailableNegative2121286 - 2125068139751.0

Displaying genes 2061 – 2070 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.