Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas plecoglossicida
Strain	strain NyZ12

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	soil environments
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
type vi secretion system protein tssa	RK21_RS08695	Not Available	Negative	1947773 - 1948870	40055.3
hcp family type vi secretion system effector	RK21_RS08700	Not Available	Negative	1948966 - 1949484	18511.7
type vi secretion system membrane subunit tssm	RK21_RS08705	Not Available	Negative	1949628 - 1952123	93083.3
type vi secretion system-associated protein tagf	RK21_RS08710	Not Available	Negative	1952120 - 1953028	33655.6
type vi secretion protein icmf/tssm n-terminal domain-containing protein	RK21_RS08715	Not Available	Negative	1953025 - 1956828	138819.0
type ivb secretion system protein icmh/dotu	RK21_RS08720	Not Available	Negative	1956859 - 1957575	26868.3
type vi secretion system baseplate subunit tssk	RK21_RS08725	Not Available	Negative	1957572 - 1958915	50268.3
type vi secretion system lipoprotein tssj	RK21_RS08730	Not Available	Negative	1958912 - 1959634	26017.8
type vi secretion system atpase tssh	RK21_RS08735	Not Available	Negative	1959659 - 1962256	94742.9
type vi secretion system baseplate subunit tssg	RK21_RS08740	Not Available	Negative	1962253 - 1963323	40888.3