Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas plecoglossicida
Strainstrain NyZ12

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas plecoglossicida strain NyZ12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil environments
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
substrate-binding periplasmic proteinRK21_RS07395Not AvailablePositive1631089 - 163187729826.8
xdhc family proteinRK21_RS07400Not AvailableNegative1631899 - 163291836052.4
c-type cytochromeRK21_RS07405Not AvailableNegative1633070 - 163441347770.2
xanthine dehydrogenase family protein molybdopterin-binding subunitRK21_RS07410Not AvailableNegative1634431 - 163668080563.7
(2fe-2s)-binding proteinRK21_RS07415Not AvailableNegative1636680 - 163713515939.2
osmc domain/ycao domain-containing proteinRK21_RS07420Not AvailablePositive1637412 - 163959881531.8
class i sam-dependent methyltransferaseRK21_RS07425Not AvailablePositive1639880 - 164069229484.9
hypothetical proteinRK21_RS07430Not AvailableNegative1640710 - 164100910261.4
tonb-dependent receptorRK21_RS07435Not AvailableNegative1641230 - 164335978666.4
hypothetical proteinRK21_RS07440Not AvailablePositive1643587 - 164416820711.9

Displaying genes 1651 – 1660 of 5781 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.