Pseudomonas plecoglossicida strain NyZ12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas plecoglossicida strain NyZ12 is a notable bacterium primarily found in soil environments. This strain is characterized by having a single replicon, which contributes to its genetic stability and adaptability in its ecological niche. The accession number for this strain is NZ_CP010359.1, which provides a reference for genetic and genomic studies. The presence of Pseudomonas plecoglossicida in soil environments suggests its potential role in nutrient cycling and soil health. This bacterium could be involved in various ecological processes, such as the degradation of organic matter and the interaction with other soil microorganisms. Understanding the specific functions and interactions of strain NyZ12 within its habitat could provide insights into its ecological significance and contributions to soil ecosystems.

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Gammaproteobacteria
Order	Pseudomonadales
Family	Pseudomonadaceae
Genus	Pseudomonas
Species	Pseudomonas plecoglossicida
Strain	strain NyZ12

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Image source: Wikipedia/Wikimedia

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	soil environments
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Pseudomonas plecoglossicida strain NyZ12 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
abc transporter atp-binding protein	RK21_RS04605	Not Available	Negative	1043193 - 1044803	59528.9
abc transporter permease	RK21_RS04610	Not Available	Negative	1044805 - 1045824	38036.7
microcin c abc transporter permease yejb	RK21_RS04615	Not Available	Negative	1045826 - 1046899	39366.8
extracellular solute-binding protein	RK21_RS04620	Not Available	Negative	1046901 - 1048736	69398.3
extracellular solute-binding protein	RK21_RS04625	Not Available	Negative	1048733 - 1050562	69785.2
lytic transglycosylase domain-containing protein	RK21_RS04630	Not Available	Negative	1050842 - 1052272	53055.3
hydroxyacylglutathione hydrolase	RK21_RS04635	Not Available	Negative	1052373 - 1053152	28690.1
class i sam-dependent methyltransferase	RK21_RS04640	Not Available	Positive	1053238 - 1054011	28585.7
ribonuclease hi	RK21_RS04645	Not Available	Positive	1054025 - 1054471	16914.3
dna polymerase iii subunit epsilon	RK21_RS04650	Not Available	Positive	1054523 - 1055281	27230.2