Pseudoalteromonas piratica strain OCN003

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas piratica strain OCN003 is a Gram-negative, aerobic heterotrophic bacterium characterized by its rod shape and motility. This strain has been identified as being associated with the coral species Montipora capitata, suggesting a potential ecological relationship within marine environments. As a heterotroph, P. piratica strain OCN003 relies on organic compounds for energy, which may indicate its role in the microbial community associated with coral reefs. Its motility could facilitate its interaction with the coral host, allowing it to navigate the complex microhabitats found in these ecosystems. The strain possesses two replicons, as indicated by its genomic data, which are available under accessions NZ_CP009888.1 and NZ_CP009889.1. This genomic organization could provide insights into the adaptability and genetic diversity of the bacterium, potentially influencing its ecological interactions and functions within the coral microbiome. Understanding the traits of Pseudoalteromonas piratica strain OCN003 enhances our knowledge of the microbial dynamics in coral reef ecosystems. By studying this strain and its relationship with Montipora capitata, researchers may gain insights into the roles of specific bacteria in coral health, resilience, and the overall functioning of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas piratica
Strainstrain OCN003

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Montipora capitata
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pseudoalteromonas piratica strain OCN003 chromosome 1, complete

Gene Summary

Adenine Count

957716 bp

Thymine Count

955076 bp

Guanine Count

643625 bp

Cytosine Count

641081 bp

Genome Length

3197498 bp

Protein-coding Genes

2848 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system needle filament subunit sctfOM33_RS17560Not AvailableNegative634323 - 6345989748.58
esce/ysce/ssae family type iii secretion system needle protein co-chaperoneOM33_RS17565Not AvailableNegative634663 - 6348667586.14
type iii secretion system inner membrane ring subunit sctdOM33_RS17570Not AvailableNegative634879 - 63616848377.2
type iii secretion system outer membrane ring subunit sctcOM33_RS17575Not AvailableNegative636165 - 63796166449.4
hypothetical proteinOM33_RS17580Not AvailableNegative637942 - 63835215684.5
hypothetical proteinOM33_RS17585Not AvailablePositive638627 - 63948432285.9
hypothetical proteinOM33_RS17590Not AvailablePositive639487 - 64033231516.9
hypothetical proteinOM33_RS17595Not AvailablePositive640585 - 64086611003.4
sycd/lcrh family type iii secretion system chaperoneOM33_RS22165Not AvailablePositive640888 - 64139118666.3
type iii secretion system translocon subunit scteOM33_RS17605Not AvailablePositive641378 - 64260742270.3

Displaying genes 3561 – 3570 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.