Pseudoalteromonas piratica strain OCN003

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas piratica strain OCN003 is a Gram-negative, aerobic heterotrophic bacterium characterized by its rod shape and motility. This strain has been identified as being associated with the coral species Montipora capitata, suggesting a potential ecological relationship within marine environments. As a heterotroph, P. piratica strain OCN003 relies on organic compounds for energy, which may indicate its role in the microbial community associated with coral reefs. Its motility could facilitate its interaction with the coral host, allowing it to navigate the complex microhabitats found in these ecosystems. The strain possesses two replicons, as indicated by its genomic data, which are available under accessions NZ_CP009888.1 and NZ_CP009889.1. This genomic organization could provide insights into the adaptability and genetic diversity of the bacterium, potentially influencing its ecological interactions and functions within the coral microbiome. Understanding the traits of Pseudoalteromonas piratica strain OCN003 enhances our knowledge of the microbial dynamics in coral reef ecosystems. By studying this strain and its relationship with Montipora capitata, researchers may gain insights into the roles of specific bacteria in coral health, resilience, and the overall functioning of marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas piratica
Strainstrain OCN003

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Montipora capitata
Cell arrangementNot Available
SporulationNot Available
Energy sourceheterotroph
PathogenicityNot Available

Genome Summary

Pseudoalteromonas piratica strain OCN003 chromosome 1, complete

Gene Summary

Adenine Count

957716 bp

Thymine Count

955076 bp

Guanine Count

643625 bp

Cytosine Count

641081 bp

Genome Length

3197498 bp

Protein-coding Genes

2848 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carboxylating nicotinate-nucleotide diphosphorylaseOM33_RS13880Not AvailablePositive3005714 - 300656830747.7
prepilin-type n-terminal cleavage/methylation domain-containing proteinOM33_RS23055Not AvailablePositive3006957 - 30070824512.68
type iv-a pilus assembly atpase pilbOM33_RS13890Not AvailablePositive3007463 - 300915162071.5
type ii secretion system f family proteinOM33_RS13895Not AvailablePositive3009244 - 301047944398.7
prepilin peptidaseOM33_RS13900Not AvailablePositive3010486 - 301137032635.7
dephospho-coa kinaseOM33_RS13905Not AvailablePositive3011372 - 301196221580.2
type iv-a pilus assembly atpase pilbOM33_RS13910Not AvailablePositive3012094 - 301377661695.1
dna gyrase inhibitor yacgOM33_RS13915Not AvailablePositive3013860 - 30140938732.22
spy/cpxp family protein refolding chaperoneOM33_RS13920Not AvailableNegative3014153 - 301460216768.7
response regulator transcription factorOM33_RS13925Not AvailablePositive3014758 - 301544125610.0

Displaying genes 2801 – 2810 of 4433 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.